PercentAcceptedMutation [view]
      PAM [view]
           SubstitutionMatrix [view]
                ScoreMatrix [view]
                AminoAcid [view]
                SequenceAlignment [view]
                PairwiseAlignment [view]
                NucleicAcid [view]
                BLOSUM [view]
                BioPython [view]
                BioPythonTutorial/CookBook/SubstitutionMatrix [view]
           MargaretDayhoff [view]
                ProteinFamily [view]
                PIR [view]
                Database [view]
                CategoryPerson [view]
           PhylogeneticTree [view]
                BioSequence [view]
                MultipleAlignment [view]
                BiologicalSequenceAnalysis [view]
                PHYLIP [view]
                MEGA [view]
                PAUP [view]
                TreeView [view]
                MaximumLikelihood [view]
                SequenceDistanceMeasureForPhylogeneticTreeConstruction [view]
           ConditionalProbability [view]
                SeeAlso [view]
                JointProbability [view]
                BayesRule [view]
           Probability [view]
                ProbabilisticModel [view]
                Permutation [view]
                Combination [view]
                StandardDeviation [view]
           MarkovChain [view]