PAM [view]
      PercentAcceptedMutation [view]
      SubstitutionMatrix [view]
           ScoreMatrix [view]
           AminoAcid [view]
           SequenceAlignment [view]
           PairwiseAlignment [view]
           NucleicAcid [view]
           BLOSUM [view]
           BioPython [view]
           BioPythonTutorial/CookBook/SubstitutionMatrix [view]
      MargaretDayhoff [view]
           ProteinFamily [view]
           PIR [view]
           Database [view]
           CategoryPerson [view]
      PhylogeneticTree [view]
           BioSequence [view]
           MultipleAlignment [view]
           BiologicalSequenceAnalysis [view]
           PHYLIP [view]
           MEGA [view]
           PAUP [view]
           TreeView [view]
           MaximumLikelihood [view]
           SequenceDistanceMeasureForPhylogeneticTreeConstruction [view]
      ConditionalProbability [view]
           SeeAlso [view]
           JointProbability [view]
           BayesRule [view]
      Probability [view]
           ProbabilisticModel [view]
           Permutation [view]
           Combination [view]
           StandardDeviation [view]
      MarkovChain [view]